BLAST Sequence Search
Search for similar sequences across all shrimp species using BLAST algorithm. Find homologous genes and analyze sequence similarity.
Example Sequence
>XP_047494425.1
MKKTILLLNAQKPSLPRAITSPPARPPVLARIGNYEEAAVARGVEGGSPSGGDEEAPLSAHLSLALLSLAPDRALPLLLPVPPSSAGRRKWPNIKIKFSGSSHRPLAQQRVVDRLGIDLGKVVTRKFSNLPTCVPIGGSYRGEPVYIVQSGCGEIWDNLMEWLIMINACKIASAARVTAVIFCFPYARQDKKDRGRAPISAKIVANMLSVAGADHIITWDLHASQIGSFFDIPVDNLYAEPAVLRWIRENIPEWGNSIIVSPAAGGARVTSIAARLNYEFALIHRERRIANEVASIVGDVKDRIAILVDDMADTCGTICHAAEKLMEAGAIKTYAILTRGIFSGPAYTRINNAACFEAVVTTVNTIPCQEQHMKESNKIQLLDVSNILAEARRTHNGESVSFLFNSVPL
About BLAST Search
- Sequence Format: Enter protein sequences in FASTA format for best results
- Species Coverage: Search runs across all 5 shrimp species databases (P. vannamei, P. monodon, P. indicus, P. chinensis, P. japonicus)
- E-value Cutoff: Default threshold is 1e-05 for significant matches
- Results: Shows top 10 hits per species with protein annotations and metabolic pathways
- Processing Time: Typical searches complete in 10-30 seconds depending on sequence length